A STUDY OF GENE EXPRESSION AND FUNCTIONAL GENOMICS OF WHEAT, RICE, COTTON AND FESTUCA PLANTS UNDER DROUGHT STRESS BY ANALYZING EXPRESSED SEQUENCE TAGS (EST)

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HEIDARY P.; MALEKI ZANJANI B.; HEIDARY SH.

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Journal: MODERN GENETICS JOURNAL (MGJ) Year:2012 | Volume:7 | Issue:2 (29) Page(s): 129-140

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Information Journal Paper

Title

A STUDY OF GENE EXPRESSION AND FUNCTIONAL GENOMICS OF WHEAT, RICE, COTTON AND FESTUCA PLANTS UNDER DROUGHT STRESS BY ANALYZING EXPRESSED SEQUENCE TAGS (EST)

Author(s)

HEIDARY P. | MALEKI ZANJANI B. | HEIDARY SH. | Issue Writer Certificate

Keywords

DROUGHT STRESSQ2

ESTQ2

FUNCTIONAL CATALOGUESQ2

FUNCTIONAL GENOMICSQ2

GENE EXPRESSIONQ2

Abstract

DROUGHT STRESS is one of the most important preventions in the crop production. The goal of this study was to find the new effective genes in DROUGHT STRESS mechanism. For this EST libraries of wheat, rice, cotton and festuca plants under DROUGHT STRESS were analyzed. The EST data of four libraries were collected from harvard university databank. To find similarity between libraries, all of EST sequences were assembled by EGassembler software. Then all contigs were analyzed by blast x from CLC Protein Workbench software against non redundant protein presented in gene banks with Evalue≤1*10-5. IDEG6 software was used for detecting genes with deferent expression pattern between libraries. The genes of lipid treansferase, phosphatase, metallothionein, dehydrin, glutathione s-transferase and LEA are important genes involved in DROUGHT STRESS in four libraries of wheat, rice, cotton and festuca.Four libraries showed significant differences in FUNCTIONAL CATALOGUES of photosynthesis, oxidative pentose phosphate, mitochondrial electron transport, cell wall, amino acid metabolism, hormone metabolism, redox regulation, misc, RNA, CHO metabolism, stress, nucleotide metabolism, secondary metabolism, protein, signaling that explaining these four catalogues response to the DROUGHT STRESS with using different sub FUNCTIONAL CATALOGUES.

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APA: Copy

HEIDARY, P., MALEKI ZANJANI, B., & HEIDARY, SH.. (2012). A STUDY OF GENE EXPRESSION AND FUNCTIONAL GENOMICS OF WHEAT, RICE, COTTON AND FESTUCA PLANTS UNDER DROUGHT STRESS BY ANALYZING EXPRESSED SEQUENCE TAGS (EST). MODERN GENETICS JOURNAL (MGJ), 7(2 (29)), 129-140. SID. https://sid.ir/paper/116408/en

Vancouver: Copy

HEIDARY P., MALEKI ZANJANI B., HEIDARY SH.. A STUDY OF GENE EXPRESSION AND FUNCTIONAL GENOMICS OF WHEAT, RICE, COTTON AND FESTUCA PLANTS UNDER DROUGHT STRESS BY ANALYZING EXPRESSED SEQUENCE TAGS (EST). MODERN GENETICS JOURNAL (MGJ)[Internet]. 2012;7(2 (29)):129-140. Available from: https://sid.ir/paper/116408/en

IEEE: Copy

P. HEIDARY, B. MALEKI ZANJANI, and SH. HEIDARY, “A STUDY OF GENE EXPRESSION AND FUNCTIONAL GENOMICS OF WHEAT, RICE, COTTON AND FESTUCA PLANTS UNDER DROUGHT STRESS BY ANALYZING EXPRESSED SEQUENCE TAGS (EST),” MODERN GENETICS JOURNAL (MGJ), vol. 7, no. 2 (29), pp. 129–140, 2012, [Online]. Available: https://sid.ir/paper/116408/en

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