Identification of Microsatellite Markers Linked with Genomic Regions Involved in Resistance to Basal Stem Rot Disease Isolates in Oily Sunflower (Helianthus annuus L. ) under Controlled Conditions

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Mousa Khalifani Khadijeh; DARVISHZADEH REZA; Abrinbana Masoud; Nouri Aram

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Journal: JOURNAL OF PLANT GENETIC RESEARCH Year:2018 | Volume:5 | Issue:2 Page(s): 1-16

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Title

Identification of Microsatellite Markers Linked with Genomic Regions Involved in Resistance to Basal Stem Rot Disease Isolates in Oily Sunflower (Helianthus annuus L. ) under Controlled Conditions

Author(s)

Mousa Khalifani Khadijeh | DARVISHZADEH REZA | Abrinbana Masoud | Nouri Aram | Issue Writer Certificate

Keywords

SunflowerQ1

Sclerotinia rotQ1

Linkage disequilibriumQ1

Horizontal resistanceQ1

Gene mappingQ1

Abstract

Sunflower (Helianthus annuus L. ) is an important crop that its oil has nutritional and high economic value. Basal stem rot, caused by Sclerotinia sclerotiorum and S. minor, is one of the important and devastating disease of Sunflower. The use of resistant cultivars is considered as the most important and effective method to control the disease. In this study, the reaction of 100 oily Sunflower lines to three isolates of S. sclerotiorum and three isolates of S. minor was studied. Identification of gene loci associated with resistance to disease was done with markers produced with 30 SSR primers pairs. The results showed that some of Sunflower genotypes had well resistant to Sclerotinia disease. Population structure analysis using Structure software identified 2 subpopulations (K=2). Association analysis using TASEEL software with general and mixed linear models (GLM and MLM) identified 14 and 12 loci, respectively that have significant association with resistant genes related to Sclerotinia. ORS617 locus was commonly related to genes associated with resistance to M1 from S. minor and J1 from S. sclerotiorum. The common markers are important in Sunflower breeding programs making possible simultaneously selection for several traits and producing resistant cultivars to Sclerotinia disease.

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APA: Copy

Mousa Khalifani, Khadijeh, DARVISHZADEH, REZA, Abrinbana, Masoud, & Nouri, Aram. (2018). Identification of Microsatellite Markers Linked with Genomic Regions Involved in Resistance to Basal Stem Rot Disease Isolates in Oily Sunflower (Helianthus annuus L. ) under Controlled Conditions. JOURNAL OF PLANT GENETIC RESEARCH, 5(2 ), 1-16. SID. https://sid.ir/paper/381384/en

Vancouver: Copy

Mousa Khalifani Khadijeh, DARVISHZADEH REZA, Abrinbana Masoud, Nouri Aram. Identification of Microsatellite Markers Linked with Genomic Regions Involved in Resistance to Basal Stem Rot Disease Isolates in Oily Sunflower (Helianthus annuus L. ) under Controlled Conditions. JOURNAL OF PLANT GENETIC RESEARCH[Internet]. 2018;5(2 ):1-16. Available from: https://sid.ir/paper/381384/en

IEEE: Copy

Khadijeh Mousa Khalifani, REZA DARVISHZADEH, Masoud Abrinbana, and Aram Nouri, “Identification of Microsatellite Markers Linked with Genomic Regions Involved in Resistance to Basal Stem Rot Disease Isolates in Oily Sunflower (Helianthus annuus L. ) under Controlled Conditions,” JOURNAL OF PLANT GENETIC RESEARCH, vol. 5, no. 2 , pp. 1–16, 2018, [Online]. Available: https://sid.ir/paper/381384/en

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