Introduction: Depression is one of the most common psychological problems which is not limited to a specific place or time, and involves people of different social classes and age groups. Anxiety may even cause physical illnesses such as blood pressure and cardiovascular disease, as well as psychiatric disorders such as depression. The aim of this study was to compare the level of depression and anxiety in native and non-native medical students. Methods: In this cross-sectional study, 21, 800 students of the faculties of Islamic Azad University of medical sciences of Tehran were assessed for eligibility. A number of 280 students were selected. The Beck depression and anxiety questionnaires were used to prepare the items of the study. Results: Among the sample of 280 students, 184 students were female, of which 160 were native and 24 were non-native. Also 98 students were male, of which 38 were native and 60 were non-native students. Also 116 students (41%) were in normal condition in terms of depression degree, 103 students (36%) had mild depression, 48 students (17%) had moderate depression, and 13 students (4%) suffered from major (severe) depression. Also, the results of the anxiety test indicated that 121 students (43%) were in the healthy condition, 100 students (35%) had mild anxiety, 43 students (15%) had moderate anxiety, and 16 students (5%) suffered from severe anxiety. Conclusion: Findings of the present study show that there is no significant difference between depression and anxiety scores between native and non-native students.