EVALUATION OF CHLOROPLAST DNA DIVERSITY AND PHYLOGENETIC RELATIONSHIP AMONG 28 IRANIAN ARTEMISIA SPECIES

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AHADI DOLATSARA ELAHE; SALAMI SEYED ALIREZA; SHOKRPOUR MAJIDE; NAGHAVI MOHAMMAD REZA; SOORNI ABOOZAR

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Journal: Iranian Journal of Horticultural Science Year:2015 | Volume:45 | Issue:4 Page(s): 401-415

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Title

EVALUATION OF CHLOROPLAST DNA DIVERSITY AND PHYLOGENETIC RELATIONSHIP AMONG 28 IRANIAN ARTEMISIA SPECIES

Author(s)

Keywords

ARTEMISIA L.Q2

CHLOROPLAST DIVERSITYQ2

PARSIMONY ANALYSISQ2

PHYLOGENETIC RELATIONSHIPSQ1

TRNL-F REGIONQ2

Abstract

Thirty-four species of genus Artemisia have been reported in Iran. From distribution, density and coverage point of view, it is one of the most important genera of plants in Iran. Since no general comprehensive system for the classification and phylogeny of this genus has been achieved yet, in this research we tried evaluation of CHLOROPLAST DIVERSITY and PHYLOGENETIC RELATIONSHIPS of Artemisia species and comparison with other species in the world. Also, we tried to identify evolutionary path, genetic similarity for some species of Iran, to maintain these genetically valuable treasures. In this research, polymorphisms were studied in non-coding regions of chloroplast DNA of 28 Iranian Artemisia species. At first, 13 public primers of chloroplast DNA were evaluated for proliferation, and according to the degree of proliferation, six primer pairs (PB, BD, Ic2, CS, trnL-FandB2B3) were selected for the final study. PCR products were digested by three restriction enzymes of MseI, EcoRI and TaqI. From 14 combinations of used primer- enzymes, 10 combinations showed polymorphism status. Data showed a completely different banding pattern in A. Armeniaca, A. incana, A. austriaca, A. melanolepis, A. oloveriana A. turanic and A. turnifortiana than other species. Formation of specific individual haploid groups individually showed that this group of Artemisia species had greater divergence in chloroplast genomes than other species. We constructed a molecular phylogeny for 28 species of Artemisia using the trnL–F region analyzed with parsimony. Our results showed a topology similar to other recent studies and suggested that A. turanica and A. spicigera are only distantly related to other Artemisia species. Phylogenetic analysis showed that the TRNL-F REGION does not have sufficient variations to identify the 28 Artemisia species. It also revealed that there is a need to search new genome regions to establish a natural classification based on modern molecular techniques.

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APA: Copy

AHADI DOLATSARA, ELAHE, SALAMI, SEYED ALIREZA, SHOKRPOUR, MAJIDE, NAGHAVI, MOHAMMAD REZA, & SOORNI, ABOOZAR. (2015). EVALUATION OF CHLOROPLAST DNA DIVERSITY AND PHYLOGENETIC RELATIONSHIP AMONG 28 IRANIAN ARTEMISIA SPECIES. IRANIAN JOURNAL OF HORTICULTURAL SCIENCES (IRANIAN JOURNAL OF AGRICULTURAL SCIENCES), 45(4), 401-415. SID. https://sid.ir/paper/148093/en

Vancouver: Copy

AHADI DOLATSARA ELAHE, SALAMI SEYED ALIREZA, SHOKRPOUR MAJIDE, NAGHAVI MOHAMMAD REZA, SOORNI ABOOZAR. EVALUATION OF CHLOROPLAST DNA DIVERSITY AND PHYLOGENETIC RELATIONSHIP AMONG 28 IRANIAN ARTEMISIA SPECIES. IRANIAN JOURNAL OF HORTICULTURAL SCIENCES (IRANIAN JOURNAL OF AGRICULTURAL SCIENCES)[Internet]. 2015;45(4):401-415. Available from: https://sid.ir/paper/148093/en

IEEE: Copy

ELAHE AHADI DOLATSARA, SEYED ALIREZA SALAMI, MAJIDE SHOKRPOUR, MOHAMMAD REZA NAGHAVI, and ABOOZAR SOORNI, “EVALUATION OF CHLOROPLAST DNA DIVERSITY AND PHYLOGENETIC RELATIONSHIP AMONG 28 IRANIAN ARTEMISIA SPECIES,” IRANIAN JOURNAL OF HORTICULTURAL SCIENCES (IRANIAN JOURNAL OF AGRICULTURAL SCIENCES), vol. 45, no. 4, pp. 401–415, 2015, [Online]. Available: https://sid.ir/paper/148093/en

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