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Information Journal Paper

Title

Identification of miRNAs and their related target genes in Papaver somniferum

Pages

  1161-1170

Abstract

 MicroRNAs (miRNAs) are a group of 17-22 nucleotides that derived from their precursor sequences and represent normally various roles in numerous biological and metabolic processes in both animals and plants. Among several approaches to identify miRNAs, the Bioinformatics-based methods are regarded as one of the easiEST and cheapEST ways to identify miRNAs. In this study, to identify potential miRNAs in Papaver somniferum, the publicly available EST sequences of the plant were obtained from NCBI GenBank and blasted against the previously known Plant miRNAs. Ultimately, seven distinguished potential miRNAs were acquired in the plant. The target genes of the predicted miRNAs included a protein serine/threonine kinase (signal transduction), PPR protein family (edit and stability of RNA) and globulins 7 S (hydration and dehydration cells), phototropin (response to phototropism), protein of serine/threonine phosphatase (glycogen metabolism), TIR protein family (defense against bacteria). These genes play an important role in plant growth and development, metabolism, morphology and determination of flowering time and diverse plant responses against different biotic and abiotic stresses.

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    APA: Copy

    KARIMI, A.A., NAGHAVI, M.R., & NASIRI, J.. (2018). Identification of miRNAs and their related target genes in Papaver somniferum. IRANIAN JOURNAL OF FIELD CROP SCIENCE (IRANIAN JOURNAL OF AGRICULTURAL SCIENCES), 48(4 ), 1161-1170. SID. https://sid.ir/paper/153728/en

    Vancouver: Copy

    KARIMI A.A., NAGHAVI M.R., NASIRI J.. Identification of miRNAs and their related target genes in Papaver somniferum. IRANIAN JOURNAL OF FIELD CROP SCIENCE (IRANIAN JOURNAL OF AGRICULTURAL SCIENCES)[Internet]. 2018;48(4 ):1161-1170. Available from: https://sid.ir/paper/153728/en

    IEEE: Copy

    A.A. KARIMI, M.R. NAGHAVI, and J. NASIRI, “Identification of miRNAs and their related target genes in Papaver somniferum,” IRANIAN JOURNAL OF FIELD CROP SCIENCE (IRANIAN JOURNAL OF AGRICULTURAL SCIENCES), vol. 48, no. 4 , pp. 1161–1170, 2018, [Online]. Available: https://sid.ir/paper/153728/en

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