NUCLEOTIDE SEQUENCE ANALYSIS OF THE FUSION PROTEIN GENE OF NEWCASTLE DISEASE VIRUSES ISOLATED FROM CHICKEN IN IRAN AND PHYLOGENETIC COMPARISON WITH SOME PREVIOUS NEWCASTLE VIRUSES OF IRAN AND OTHER COUNTRY

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SHATERI S.; POURBAKHSH S.A.; BOZORGHMEHRI FARD M.H.; SHOSHTARI A.H.; CHARKHKAR S.

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Journal: JOURNAL OF COMPARATIVE PATHOBIOLOGY IRAN Year:2009 | Volume:6 | Issue:3 Page(s): 3-10

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Title

NUCLEOTIDE SEQUENCE ANALYSIS OF THE FUSION PROTEIN GENE OF NEWCASTLE DISEASE VIRUSES ISOLATED FROM CHICKEN IN IRAN AND PHYLOGENETIC COMPARISON WITH SOME PREVIOUS NEWCASTLE VIRUSES OF IRAN AND OTHER COUNTRY

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Keywords

NEWCASTLE VIRUSQ2

CLEAVAGE SITSQ3

PHYLOGENETIC ANALYSISQ3

F PROTEINQ3

Abstract

In this study 9 NEWCASTLE VIRUS (NDV), obtained from Iranian industrial chicken-farms, were isolated. A piece of 1349 nucleotide possessing virus's F PROTEIN CLEAVAGE SITS was sequentially determined.Amino-acids of F PROTEIN in isolated viruses were phylogenetically compared with previous viruses in Iran and the rest of the world.96.5- 100% of similarity was observed among isolated viruses in different provinces. The nucleotide sequence of the piece was analyzed considering encoding sequence of F PROTEIN in NDV-existing in gene bank by using blast software, The highest nucleotide similarity with strains of Italy/3286/00 and sterna/astr. Amino acids and F PROTEIN CLEAVAGE SITS of these viruses is quite the same and RRQRRF. They did not show any change to the previously isolated viruses in Iran, but in 3 viruses out of 9. Amino acid position 265 changed from serine to glycine.Phylogenetic analysis indicated that all beer common source as previous viruses and they were included in a separate group along with Russian, Italy, Iraq, Turkey, Saudi Arabia, Kuwait, Kazakhstan, Lebanon, South Korea, Japan and South Africa viruses.

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APA: Copy

SHATERI, S., POURBAKHSH, S.A., BOZORGHMEHRI FARD, M.H., SHOSHTARI, A.H., & CHARKHKAR, S.. (2009). NUCLEOTIDE SEQUENCE ANALYSIS OF THE FUSION PROTEIN GENE OF NEWCASTLE DISEASE VIRUSES ISOLATED FROM CHICKEN IN IRAN AND PHYLOGENETIC COMPARISON WITH SOME PREVIOUS NEWCASTLE VIRUSES OF IRAN AND OTHER COUNTRY. JOURNAL OF COMPARATIVE PATHOBIOLOGY IRAN, 6(3), 3-10. SID. https://sid.ir/paper/197500/en

Vancouver: Copy

SHATERI S., POURBAKHSH S.A., BOZORGHMEHRI FARD M.H., SHOSHTARI A.H., CHARKHKAR S.. NUCLEOTIDE SEQUENCE ANALYSIS OF THE FUSION PROTEIN GENE OF NEWCASTLE DISEASE VIRUSES ISOLATED FROM CHICKEN IN IRAN AND PHYLOGENETIC COMPARISON WITH SOME PREVIOUS NEWCASTLE VIRUSES OF IRAN AND OTHER COUNTRY. JOURNAL OF COMPARATIVE PATHOBIOLOGY IRAN[Internet]. 2009;6(3):3-10. Available from: https://sid.ir/paper/197500/en

IEEE: Copy

S. SHATERI, S.A. POURBAKHSH, M.H. BOZORGHMEHRI FARD, A.H. SHOSHTARI, and S. CHARKHKAR, “NUCLEOTIDE SEQUENCE ANALYSIS OF THE FUSION PROTEIN GENE OF NEWCASTLE DISEASE VIRUSES ISOLATED FROM CHICKEN IN IRAN AND PHYLOGENETIC COMPARISON WITH SOME PREVIOUS NEWCASTLE VIRUSES OF IRAN AND OTHER COUNTRY,” JOURNAL OF COMPARATIVE PATHOBIOLOGY IRAN, vol. 6, no. 3, pp. 3–10, 2009, [Online]. Available: https://sid.ir/paper/197500/en

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