ASSESSMENT OF GENETIC DIVERSITY OF FARS AND KHORASAN PROVINCES GRAPEVINES (VITIS VINIFERA L.) USING MICROSATELLITE MARKERS

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AALIPANAH L.; HOJAT HASAN; GHOLAMI MANSOUR; GHARAHYAZI BEHZAD; MOHAMMADI A.A.GH.; NAJAFI JAVAD

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Journal: IRANIAN JOURNAL OF AGRICULTURAL SCIENCES (JOURNAL OF AGRICULTURE) Year:2006 | Volume:37 | Issue:3 Page(s): 517-527

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Title

ASSESSMENT OF GENETIC DIVERSITY OF FARS AND KHORASAN PROVINCES GRAPEVINES (VITIS VINIFERA L.) USING MICROSATELLITE MARKERS

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Keywords

GRAPEVINEQ2

MOLECULAR MARKERSQ2

PCRQ2

GENETIC DIVERSITYQ3

Abstract

Because of high polymorphic information content (PIC) and other desirable properties, microsatellite markers are used as informative markers in genetic and breeding studies such as those of GENETIC DIVERSITY in crop plants. In this research, microsatellite markers were employed to evaluate GENETIC DIVERSITY and grouping of 72 GRAPEVINE cultivars, originated from Fars and Khorasan provinces as well as 18 European cultivars. Totally, 94 polymorphic alleles were found among 90 cultivars, with an average of 7.8 alleles and 4.4 effective alleles for 12 loci. Polymorphic information content values for these markers ranged from 0.417 (VVMD26) to 0.898 (VVMD5). The average expected and observed heterozygosity among 90 studied cultivars were 0.743 and 0.546, respectively. At all loci, except VVMD21, the expected heterozygosity values were higher than those observed. That could be due to the occurrence of null alleles at these loci. A comparison of allelic data among Europe, Fars, and Khorasan populations revealed similar levels of genetic variation in all groups. The mean number of alleles per population varied from 6 (Europe) to 6.41 (Khorasan). A comparision of population parameters indicated more similarity between Fars and Khorasan cultivars as compared with the European ones. Cluster analysis using UPGMA method based on Jaccard's coefficient of similarity divided cultivars into 8 groups. Results obtained from principal component analysis (PCA) also supported this grouping.

Cites

PARENTAGE ANALYSIS OF SEEDLESS GRAPEVINE GENOTYPES WITH LIKELIHOOD BASED ASSIGNMENT APPROACHES

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APA: Copy

AALIPANAH, L., HOJAT, HASAN, GHOLAMI, MANSOUR, GHARAHYAZI, BEHZAD, MOHAMMADI, A.A.GH., & NAJAFI, JAVAD. (2006). ASSESSMENT OF GENETIC DIVERSITY OF FARS AND KHORASAN PROVINCES GRAPEVINES (VITIS VINIFERA L.) USING MICROSATELLITE MARKERS. IRANIAN JOURNAL OF AGRICULTURAL SCIENCES (JOURNAL OF AGRICULTURE), 37(3), 517-527. SID. https://sid.ir/paper/8346/en

Vancouver: Copy

AALIPANAH L., HOJAT HASAN, GHOLAMI MANSOUR, GHARAHYAZI BEHZAD, MOHAMMADI A.A.GH., NAJAFI JAVAD. ASSESSMENT OF GENETIC DIVERSITY OF FARS AND KHORASAN PROVINCES GRAPEVINES (VITIS VINIFERA L.) USING MICROSATELLITE MARKERS. IRANIAN JOURNAL OF AGRICULTURAL SCIENCES (JOURNAL OF AGRICULTURE)[Internet]. 2006;37(3):517-527. Available from: https://sid.ir/paper/8346/en

IEEE: Copy

L. AALIPANAH, HASAN HOJAT, MANSOUR GHOLAMI, BEHZAD GHARAHYAZI, A.A.GH. MOHAMMADI, and JAVAD NAJAFI, “ASSESSMENT OF GENETIC DIVERSITY OF FARS AND KHORASAN PROVINCES GRAPEVINES (VITIS VINIFERA L.) USING MICROSATELLITE MARKERS,” IRANIAN JOURNAL OF AGRICULTURAL SCIENCES (JOURNAL OF AGRICULTURE), vol. 37, no. 3, pp. 517–527, 2006, [Online]. Available: https://sid.ir/paper/8346/en

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