IN SILICO GENOME-WIDE SCREENING FOR TNRA-REGULATED GENES OF BACILLUS CLAUSII

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FARAZMAND ABBAS; YAKHCHALI BAGHER; SHARIATI PARVIN; MINUCHEHR ZARRIN; OFOGHI HAMIDEH

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Journal: Iranian Journal of Biotechnology Year:2012 | Volume:10 | Issue:1 Page(s): 61-65

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Title

IN SILICO GENOME-WIDE SCREENING FOR TNRA-REGULATED GENES OF BACILLUS CLAUSII

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Keywords

GENE REGULATIONQ2

TNRAQ2

BACILLUS CLAUSIIQ3

NITROGEN METABOLISMQ2

Abstract

Bacillus clausii TNRA transcription factor is required for global nitrogen regulation. In order to obtain an overview of GENE REGULATION by TNRA in B. clausii KSMK16, the entire genome of B. clausii was screened for the consensus sequence, 5’-TGTNAN7TNACA-3’ known as the TNRA box, and 13 transcription units were found containing a putative TNRA box. The TNRA targets identified in this study were TNRA, glnA, nrgA, nasFDEB, puc genes, licT, the two operons of the oligopeptide ABC transporter, lytR, transcriptional regulator of the Lrp/AsnC family, sodium-dependent transporter of SNF family, hyu genes and a biochemically uncharacterized protein.

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APA: Copy

FARAZMAND, ABBAS, YAKHCHALI, BAGHER, SHARIATI, PARVIN, MINUCHEHR, ZARRIN, & OFOGHI, HAMIDEH. (2012). IN SILICO GENOME-WIDE SCREENING FOR TNRA-REGULATED GENES OF BACILLUS CLAUSII. IRANIAN JOURNAL OF BIOTECHNOLOGY, 10(1), 61-65. SID. https://sid.ir/paper/139250/en

Vancouver: Copy

FARAZMAND ABBAS, YAKHCHALI BAGHER, SHARIATI PARVIN, MINUCHEHR ZARRIN, OFOGHI HAMIDEH. IN SILICO GENOME-WIDE SCREENING FOR TNRA-REGULATED GENES OF BACILLUS CLAUSII. IRANIAN JOURNAL OF BIOTECHNOLOGY[Internet]. 2012;10(1):61-65. Available from: https://sid.ir/paper/139250/en

IEEE: Copy

ABBAS FARAZMAND, BAGHER YAKHCHALI, PARVIN SHARIATI, ZARRIN MINUCHEHR, and HAMIDEH OFOGHI, “IN SILICO GENOME-WIDE SCREENING FOR TNRA-REGULATED GENES OF BACILLUS CLAUSII,” IRANIAN JOURNAL OF BIOTECHNOLOGY, vol. 10, no. 1, pp. 61–65, 2012, [Online]. Available: https://sid.ir/paper/139250/en

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