Statement of the Problem: E-cadherin and N-cadherin are two types of cell adhesion mole-cules that are involved in organ development, wound healing, and pathological conditions through the process of epithelial-mesenchymal transition (EMT). However, their role has not yet been fully elucidated in the pathogenesis of periodontal diseases. Purpose: To determine the expression level of proteins associated with the EMT process (E-cadherin and N-cadherin) in chronic periodontitis. Materials and Method: In this cross-sectional study, 37 samples (19 cases with healthy gingival tissue and 18 cases with severe chronic periodontitis) that referred to the Periodon-tology Department of Zahedan Dental School, Zahedan, Iran, in 2018 were included. The samples were immunohistochemically stained with E-cadherin and N-cadherin monoclonal antibodies. Afterward, the percentage of stained cells and the staining intensity of the cells were evaluated. Finally, the obtained data were analyzed using by IBM©,SPSS©,Statistics version 21 using Mann-Whitney statistical test. Results: In this study, 89. 5% of the healthy gingival tissue samples and 61. 1% of samples with chronic periodontitis showed E-cadherin expression in more than 50% of cells. This difference between the two groups was not significant (p= 0. 13),however, the E-cadherin staining intensity of the healthy gingival tissue was strong while that of the samples with chronic periodontitis was moderate (p= 0. 002). The N-cadherin expression was negative in 68. 4% of healthy gingival cases, while 50% of the cases with chronic periodontitis showed a high expression of N-cadherin. This difference was statistically significant (p= 0. 04). More-over, the N-cadherin staining intensity also had a significant difference between the two groups (p= 0. 004). Conclusion: Based on the results of the present study, the increased expression of N-cadherin and reduction of staining intensity of E-cadherin was found in chronic periodontitis compared to healthy gingival tissues. Therefore, EMT process may be involved in the path-ogenesis of severe chronic periodontitis.