EVALUATION OF THE CBL FAMILY GENE EXPRESSION UNDER DROUGHT STRESS AND VIRUS ATTACK IN TWO SUSCEPTIBLE AND DROUGHT TOLERANT TOMATO CULTIVARS USING SEMI-QUANTITATIVE PCR ANALYSIS

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AGHAEI PEYMAN; EBRAHIMI MOHAMMAD ALI; Hosseini Tafreshi Sayed Ali; HAERINASAB MARYAM; ENTESHARI SHEKOOFEH

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Journal: Journal of Plant Biological Sciences Year:2017 | Volume:9 | Issue:32 Page(s): 89-106

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Title

EVALUATION OF THE CBL FAMILY GENE EXPRESSION UNDER DROUGHT STRESS AND VIRUS ATTACK IN TWO SUSCEPTIBLE AND DROUGHT TOLERANT TOMATO CULTIVARS USING SEMI-QUANTITATIVE PCR ANALYSIS

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Keywords

CALCINEURIN B-LIKE PROTEINSQ1

CALCIUMQ1

DROUGHT STRESSQ2

GENE EXPRESSIONQ1

TOMATOQ2

VIRUS ATTACKQ2

Abstract

Eleven genes encoding CALCINEURIN B-LIKE PROTEINS with a high degree of sequence conservation were identified using bioinformatics approaches in TOMATO. These proteins classified into five clusters including SlCBL1, SlCBL3, SlCBL4, SlCBL8 and SlCBL10 using orthology-based method of nomenclature. Sequence analysis showed that all five members of SlCBL1 and SlCBL4 contained a myristoylation conserved motif (MGXXXS/T) at their N-terminals. Semi-quantitative RT-PCR showed that among the SlCBL1 members, SlCBL1-3 up-regulated under both drought and virus stresses, as well as the combined treatment. Although, both SlCBL3-1 and SlCBL3-2 up-regulated under both drought and virus stresses in both susceptive and resistant cultivars, the combined stress did not have any additional effect on the expression. Among SlCBL4 members, only SlCBL4-1 upregulated under drought or VIRUS ATTACK. There was a diverse pattern of expression between the two SlCBL8 members under different stresses in both cultivars. SlCBL10 showed no change in expression pattern under drought or virus stresses in susceptive cultivar and this gene showed to be up-regulated under drought in resistant cultivar. Overall, it was concluded that changes in the expression pattern of CBL genes under biotic and abiotic stresses seemingly induced various CBL/CIPK patways in suseptive or resistant plants.

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APA: Copy

AGHAEI, PEYMAN, EBRAHIMI, MOHAMMAD ALI, Hosseini Tafreshi, Sayed Ali, HAERINASAB, MARYAM, & ENTESHARI, SHEKOOFEH. (2017). EVALUATION OF THE CBL FAMILY GENE EXPRESSION UNDER DROUGHT STRESS AND VIRUS ATTACK IN TWO SUSCEPTIBLE AND DROUGHT TOLERANT TOMATO CULTIVARS USING SEMI-QUANTITATIVE PCR ANALYSIS. IRANIAN JOURNAL OF PLANT BIOLOGY, 9(32), 89-106. SID. https://sid.ir/paper/159969/en

Vancouver: Copy

AGHAEI PEYMAN, EBRAHIMI MOHAMMAD ALI, Hosseini Tafreshi Sayed Ali, HAERINASAB MARYAM, ENTESHARI SHEKOOFEH. EVALUATION OF THE CBL FAMILY GENE EXPRESSION UNDER DROUGHT STRESS AND VIRUS ATTACK IN TWO SUSCEPTIBLE AND DROUGHT TOLERANT TOMATO CULTIVARS USING SEMI-QUANTITATIVE PCR ANALYSIS. IRANIAN JOURNAL OF PLANT BIOLOGY[Internet]. 2017;9(32):89-106. Available from: https://sid.ir/paper/159969/en

IEEE: Copy

PEYMAN AGHAEI, MOHAMMAD ALI EBRAHIMI, Sayed Ali Hosseini Tafreshi, MARYAM HAERINASAB, and SHEKOOFEH ENTESHARI, “EVALUATION OF THE CBL FAMILY GENE EXPRESSION UNDER DROUGHT STRESS AND VIRUS ATTACK IN TWO SUSCEPTIBLE AND DROUGHT TOLERANT TOMATO CULTIVARS USING SEMI-QUANTITATIVE PCR ANALYSIS,” IRANIAN JOURNAL OF PLANT BIOLOGY, vol. 9, no. 32, pp. 89–106, 2017, [Online]. Available: https://sid.ir/paper/159969/en

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