COMPREHENSIVE PHYLOGENETIC, SIMILARITY AND ALLERGENICITY ANALYSIS OF BOOPHILUS GENUS TICK TROPOMYOSIN PROTEIN

Q: How can I download an article?

To download an article from SID, first log in to the site, search for the article title, and click on the 'Download Article' option.

Q: How can I download an ISI article?

To download an ISI article on SID, enter the keyword or article title in the search bar, view the relevant results, click on the desired article, and select the 'Download Article' option.

Q: How can I access the SID database?

To access the SID database, visit SID.ir, create an account, and log in to access scientific resources.

Q: Is downloading articles from SID free?

Some articles on SID are available for free, while others require payment. Details are specified on the article's page.

RANJBAR MOHAMMAD MAHDI; NABIAN SEDIGHEH; MOUSAVI NASAB SEYED DAWOOD; TAHERI MOHAMMAD; GHORBAN KHODAYAR; DADMANESH MARYAM; MALEKAN MOHAMMAD; AHMADI NAYEB ALI; IMANZAD MASOUMEH

مرکز اطلاعات علمی Scientific Information Database (SID) - Trusted Source for Research and Academic Resources

Journal Paper

Paper Information

Journal: Archives of Advances in Biosciences Year:2013 | Volume:4 | Issue:4 Page(s): 70-82

Download Full-Text

View:

187

Download:

Cites:

Information Journal Paper

Title

COMPREHENSIVE PHYLOGENETIC, SIMILARITY AND ALLERGENICITY ANALYSIS OF BOOPHILUS GENUS TICK TROPOMYOSIN PROTEIN

Author(s)

Keywords

TROPOMYOSIN

BOOPHILUS GENUS

PHYLOGENETIC

SIMILARITY

ALLERGENICITY

Abstract

Boophilus genus ticks are responsible for transferring some pathogens and reducing production factors in cattle. Tropomysin (TPM) protein has actin regulator activity and playing important role in immune and allergic reactions. The main goal is to determine different aspects of PHYLOGENETIC, SIMILARITY, homology, structure and ALLERGENICITY of TPM protein. In prior study, we identified TPM by using Mass-spectrometry in Boophilus anulatus larva proteins extraction. Analysis by NCBI and Mascot software showed complete SIMILARITY of this protein with Boophilus microplus. TPM Blasting, invertebrates TPM sequences retrieval, aligning and analyzing of conserved and variable regions along sequences were next steps. Also, construction the PHYLOGENETIC tree, overall mean distances estimation, homology protein secondary structure, allergencity analysis was achieved. The most similar sequences to BOOPHILUS GENUS TPM are Haemaphysalis sp., Scolopendra sp. and etc., respectively. The multiple sequence alignment showed that conserved and variable regions stretched in different part of TPM. The close relationships in PHYLOGENETIC tree between Ticks and Mites were seen, although the TPM sequences in ticks are more similar to each other than to mites and assume as the nearest relatives. Insects TPM like worms, located in two separated clades, and Trichinella spiralis in worm clades are more related taxa to members of ticks and mites groups. Furthermore, overall mean distances over sequence pairs reflects TPM conservation during speciation. TPM has high homology in different species and has two domain of α-helix that cannot form disulfide bonds. Finally, ALLERGENICITY analysis by separated and hybrid approach showed it undoubted is allergen and candidates some peptides as responsible for ALLERGENICITY of TPM. The comprehensive analysis of TPM has never been easy, especially when we attempt to make statements from different aspects about this protein. Our study revealed the some unique and valuable aspects of TPM protein of BOOPHILUS GENUS, and will help to further studies on mentioned protein.

Cites

No record.

References

No record.

Cite

APA: Copy

RANJBAR, MOHAMMAD MAHDI, NABIAN, SEDIGHEH, MOUSAVI NASAB, SEYED DAWOOD, TAHERI, MOHAMMAD, GHORBAN, KHODAYAR, DADMANESH, MARYAM, MALEKAN, MOHAMMAD, AHMADI, NAYEB ALI, & IMANZAD, MASOUMEH. (2013). COMPREHENSIVE PHYLOGENETIC, SIMILARITY AND ALLERGENICITY ANALYSIS OF BOOPHILUS GENUS TICK TROPOMYOSIN PROTEIN. ARCHIVES OF ADVANCES IN BIOSCIENCES (JOURNAL OF PARAMEDICAL SCIENCES), 4(4), 70-82. SID. https://sid.ir/paper/315831/en

Vancouver: Copy

RANJBAR MOHAMMAD MAHDI, NABIAN SEDIGHEH, MOUSAVI NASAB SEYED DAWOOD, TAHERI MOHAMMAD, GHORBAN KHODAYAR, DADMANESH MARYAM, MALEKAN MOHAMMAD, AHMADI NAYEB ALI, IMANZAD MASOUMEH. COMPREHENSIVE PHYLOGENETIC, SIMILARITY AND ALLERGENICITY ANALYSIS OF BOOPHILUS GENUS TICK TROPOMYOSIN PROTEIN. ARCHIVES OF ADVANCES IN BIOSCIENCES (JOURNAL OF PARAMEDICAL SCIENCES)[Internet]. 2013;4(4):70-82. Available from: https://sid.ir/paper/315831/en

IEEE: Copy

MOHAMMAD MAHDI RANJBAR, SEDIGHEH NABIAN, SEYED DAWOOD MOUSAVI NASAB, MOHAMMAD TAHERI, KHODAYAR GHORBAN, MARYAM DADMANESH, MOHAMMAD MALEKAN, NAYEB ALI AHMADI, and MASOUMEH IMANZAD, “COMPREHENSIVE PHYLOGENETIC, SIMILARITY AND ALLERGENICITY ANALYSIS OF BOOPHILUS GENUS TICK TROPOMYOSIN PROTEIN,” ARCHIVES OF ADVANCES IN BIOSCIENCES (JOURNAL OF PARAMEDICAL SCIENCES), vol. 4, no. 4, pp. 70–82, 2013, [Online]. Available: https://sid.ir/paper/315831/en

Related Journal Papers

No record.

Related Seminar Papers

No record.

Related Plans

No record.

Recommended Workshops