POPULATION STRUCTURE OF SEA CUCUMBER HOLOTHURIA PARVA USING 16S MITOCHONDRIAL RRNA GENE SEQUENCES IN THE NORTHERN COAST OF PERSIAN GULF

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ALAMI NAYSI LEALA; SALARI ALIABADI MOHAMMAD ALI; ZOLGHARNEAN HOSSAIN; PASHA ZANOUSI HOSSAIN

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Journal: JOURNAL OF MARINE SCIENCES AND TECHNOLOGY Year:2016 | Volume:14 | Issue:4 Page(s): 0-0

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Title

POPULATION STRUCTURE OF SEA CUCUMBER HOLOTHURIA PARVA USING 16S MITOCHONDRIAL RRNA GENE SEQUENCES IN THE NORTHERN COAST OF PERSIAN GULF

Author(s)

ALAMI NAYSI LEALA | SALARI ALIABADI MOHAMMAD ALI | ZOLGHARNEAN HOSSAIN | PASHA ZANOUSI HOSSAIN | Issue Writer Certificate

Keywords

HOLOTHURIA PARVAQ2

POPULATION STRUCTUREQ2

16S RRNAQ1

BOSTANEH PORTQ2

DAYER PORTQ2

Abstract

In order to investigate the POPULATION STRUCTURE species of sea cucumberHOLOTHURIA PARVA in the two regions BOSTANEH PORT and DAYER PORT, 16S RRNA gene sequencing method was used. In total, 417 nucleotide loci were determined, after investigating in the NCBI database, sequences were consistent with 16S RRNA gene and samples were verified to belong to the speciesH. parva. In total four haplotypes were identified, one of which was common in both regions. BOSTANEH PORT had 3 haplotypes and DAYER PORT had 2 haplotypes. Haplotype diversity was estimated to be 83 percent in BOSTANEH PORT and 50 percent in DAYER PORT. Estimated Nucleotide diversity in Bostaneh and DAYER PORTs were 0.007 and 0.002 respectively. Low genetic differentiation (Fst=0.000), divergences rate (Dxy=0.0048) and high gene flow (Nm=1874) between the two regions were estimated. Based on this study Bostaneh and DAYER PORT samples have probably diverged from an identical population since a high gene flow and low differentiation is observed among them. There is also a common haplotype, suggesting a common ancestor ofH. parva in two regions.

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APA: Copy

ALAMI NAYSI, LEALA, SALARI ALIABADI, MOHAMMAD ALI, ZOLGHARNEAN, HOSSAIN, & PASHA ZANOUSI, HOSSAIN. (2016). POPULATION STRUCTURE OF SEA CUCUMBER HOLOTHURIA PARVA USING 16S MITOCHONDRIAL RRNA GENE SEQUENCES IN THE NORTHERN COAST OF PERSIAN GULF. JOURNAL OF MARINE SCIENCES AND TECHNOLOGY, 14(4), 0-0. SID. https://sid.ir/paper/356509/en

Vancouver: Copy

ALAMI NAYSI LEALA, SALARI ALIABADI MOHAMMAD ALI, ZOLGHARNEAN HOSSAIN, PASHA ZANOUSI HOSSAIN. POPULATION STRUCTURE OF SEA CUCUMBER HOLOTHURIA PARVA USING 16S MITOCHONDRIAL RRNA GENE SEQUENCES IN THE NORTHERN COAST OF PERSIAN GULF. JOURNAL OF MARINE SCIENCES AND TECHNOLOGY[Internet]. 2016;14(4):0-0. Available from: https://sid.ir/paper/356509/en

IEEE: Copy

LEALA ALAMI NAYSI, MOHAMMAD ALI SALARI ALIABADI, HOSSAIN ZOLGHARNEAN, and HOSSAIN PASHA ZANOUSI, “POPULATION STRUCTURE OF SEA CUCUMBER HOLOTHURIA PARVA USING 16S MITOCHONDRIAL RRNA GENE SEQUENCES IN THE NORTHERN COAST OF PERSIAN GULF,” JOURNAL OF MARINE SCIENCES AND TECHNOLOGY, vol. 14, no. 4, pp. 0–0, 2016, [Online]. Available: https://sid.ir/paper/356509/en

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