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Information Journal Paper

Title

Long non-coding RNAs as potential biomarkers or therapeutic targets in gastric cancer

Pages

  297-306

Keywords

Messenger RNA (mRNA) 
Long non-coding RNAs (lncRNAs) 

Abstract

 Aim: This study aimed to find lncRNAs and mRNAs that were expressed differently by combining microarray datasets from different studies. This was done to find important target genes in Gastric cancer for anti-cancer therapy. Background: Gastric cancer (GC) is the fourth most frequent and second-most deadly malignancy worldwide. Thus, genetic diagnosis and treatment should focus on genetic and epigenetic variables. Based on several studies, disordered expression of non-coding RNAs (ncRNAs), such as lncRNAs, regulate Gastric cancer invasion and metastasis. Besides, lncRNAs cooperatively regulate gene expression and GC progression. Methods: We obtained differentially expressed mRNAs (DEmRNAs) and lncRNAs (DElncRNAs) from three GC tissue microarray datasets by meta-analysis and screened genes using the "Limma" package. Then, using the RNAInter database, we allocated DEmRNAs to each DElncRNA. ClusterProfiler and GOplot programs were used to analyze function enrichment pathways and gene ontologies for final DEmRNAs. Results: A total of 9 differentially expressed lncRNAs (DElncRNAs) (5 up-regulated and 4 down-regulated), and 856 DEmRNAs (451 up-regulated and 405 down-regulated) between tumor and adjacent normal samples were found. Finally, 117 differentially expressed mRNAs were predicted as interactors of six DElncRNAs (H19, WT1-AS, EMX2OS, HOTAIR, ZEB1-AS1, and LINC00261). Conclusion: In order to promote cancer therapeutics and give knowledge on the process of carcinogenesis, our study projected a network of drug-gene interactions for discovered genes and presented relevant prospective Biomarkers for the prognosis of patients with stomach cancer.

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    APA: Copy

    ASKARI, NAHID, Salek Esfahani, Behnaz, Parvizpour, Sepideh, SHAFIEIPOUR, SARA, & HADIZADEH, MORTEZA. (2023). Long non-coding RNAs as potential biomarkers or therapeutic targets in gastric cancer. GASTROENTEROLOGY AND HEPATOLOGY FROM BED TO BENCH, 16(3), 297-306. SID. https://sid.ir/paper/1101572/en

    Vancouver: Copy

    ASKARI NAHID, Salek Esfahani Behnaz, Parvizpour Sepideh, SHAFIEIPOUR SARA, HADIZADEH MORTEZA. Long non-coding RNAs as potential biomarkers or therapeutic targets in gastric cancer. GASTROENTEROLOGY AND HEPATOLOGY FROM BED TO BENCH[Internet]. 2023;16(3):297-306. Available from: https://sid.ir/paper/1101572/en

    IEEE: Copy

    NAHID ASKARI, Behnaz Salek Esfahani, Sepideh Parvizpour, SARA SHAFIEIPOUR, and MORTEZA HADIZADEH, “Long non-coding RNAs as potential biomarkers or therapeutic targets in gastric cancer,” GASTROENTEROLOGY AND HEPATOLOGY FROM BED TO BENCH, vol. 16, no. 3, pp. 297–306, 2023, [Online]. Available: https://sid.ir/paper/1101572/en

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